STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rspry1Ring finger and SPRY domain containing 1. (588 aa)    
Predicted Functional Partners:
slc10a7
Solute carrier family 10 member 7.
      
 0.799
nudt13
Nudix (nucleoside diphosphate linked moiety X)-type motif 13.
      
 0.770
LOC103472857
Coiled-coil domain containing 106b.
      
 0.763
efcab1
Uncharacterized protein.
      
 0.758
gpatch3
G patch domain containing 3.
      
 0.758
eaf1
EAF domain-containing protein.
      
 0.729
ist1
IST1 factor associated with ESCRT-III.
      
 0.729
arl2bp
ADP-ribosylation factor-like 2 binding protein.
      
 0.727
dis3
DIS3 exosome endoribonuclease and 3'-5' exoribonuclease; Belongs to the RNR ribonuclease family.
   
  
 0.726
tut1
Terminal uridylyl transferase 1, U6 snRNA-specific.
     
 0.708
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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