aggf1 protein (Poecilia reticulata) - STRING interaction network

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Score

aggf1

Angiogenic factor with G patch and FHA domains 1. (751 aa)

Predicted Functional Partners:

cherp

0.875

ENSPREP00000000945

0.782

SNRPC

0.764

sf3a2

0.753

ddx10

0.640

rapgef2

0.608

ncbp2

0.606

dhx9

0.600

rae1

0.598

nol6

0.587

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000000945	aggf1	ENSPREP00000000945	ENSPREP00000001293	Uncharacterized protein.	Angiogenic factor with G patch and FHA domains 1.	0.782
ENSPREP00000000945	ddx10	ENSPREP00000000945	ENSPREP00000028905	Uncharacterized protein.	RNA helicase.	0.461
SNRPC	aggf1	ENSPREP00000019263	ENSPREP00000001293	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	Angiogenic factor with G patch and FHA domains 1.	0.764
SNRPC	ncbp2	ENSPREP00000019263	ENSPREP00000031952	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.950
SNRPC	sf3a2	ENSPREP00000019263	ENSPREP00000026350	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	Splicing factor 3a, subunit 2.	0.975
aggf1	ENSPREP00000000945	ENSPREP00000001293	ENSPREP00000000945	Angiogenic factor with G patch and FHA domains 1.	Uncharacterized protein.	0.782
aggf1	SNRPC	ENSPREP00000001293	ENSPREP00000019263	Angiogenic factor with G patch and FHA domains 1.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.764
aggf1	cherp	ENSPREP00000001293	ENSPREP00000030676	Angiogenic factor with G patch and FHA domains 1.	Calcium homeostasis endoplasmic reticulum protein.	0.875
aggf1	ddx10	ENSPREP00000001293	ENSPREP00000028905	Angiogenic factor with G patch and FHA domains 1.	RNA helicase.	0.640
aggf1	dhx9	ENSPREP00000001293	ENSPREP00000028546	Angiogenic factor with G patch and FHA domains 1.	DEAH (Asp-Glu-Ala-His) box helicase 9.	0.600
aggf1	ncbp2	ENSPREP00000001293	ENSPREP00000031952	Angiogenic factor with G patch and FHA domains 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.606
aggf1	nol6	ENSPREP00000001293	ENSPREP00000006993	Angiogenic factor with G patch and FHA domains 1.	Nucleolar protein 6.	0.587
aggf1	rae1	ENSPREP00000001293	ENSPREP00000024557	Angiogenic factor with G patch and FHA domains 1.	Ribonucleic acid export 1.	0.598
aggf1	rapgef2	ENSPREP00000001293	ENSPREP00000011362	Angiogenic factor with G patch and FHA domains 1.	Rap guanine nucleotide exchange factor (GEF) 2.	0.608
aggf1	sf3a2	ENSPREP00000001293	ENSPREP00000026350	Angiogenic factor with G patch and FHA domains 1.	Splicing factor 3a, subunit 2.	0.753
cherp	aggf1	ENSPREP00000030676	ENSPREP00000001293	Calcium homeostasis endoplasmic reticulum protein.	Angiogenic factor with G patch and FHA domains 1.	0.875
cherp	dhx9	ENSPREP00000030676	ENSPREP00000028546	Calcium homeostasis endoplasmic reticulum protein.	DEAH (Asp-Glu-Ala-His) box helicase 9.	0.413
cherp	ncbp2	ENSPREP00000030676	ENSPREP00000031952	Calcium homeostasis endoplasmic reticulum protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.798
cherp	sf3a2	ENSPREP00000030676	ENSPREP00000026350	Calcium homeostasis endoplasmic reticulum protein.	Splicing factor 3a, subunit 2.	0.993
ddx10	ENSPREP00000000945	ENSPREP00000028905	ENSPREP00000000945	RNA helicase.	Uncharacterized protein.	0.461