STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xpo4Exportin 4. (1156 aa)    
Predicted Functional Partners:
xpot
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 
 0.987
thoc2
THO complex 2.
    
 
 0.978
xpo6
Exportin 6.
   
 
 0.976
cse1l
CSE1 chromosome segregation 1-like (yeast).
   
 
 0.972
xpo7
Exportin 7.
   
 
0.968
xpo5
Exportin 5.
   
 
 0.962
LOC103477318
Exportin 1 (CRM1 homolog, yeast) b.
   
 
 0.959
xpo1
Exportin 1 (CRM1 homolog, yeast) a.
   
 
 0.959
LOC103463745
Importin 13.
    
 
 0.771
eif5a2
eIF-5a domain-containing protein.
    
 
 0.744
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.