STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zdhhc6Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (412 aa)    
Predicted Functional Partners:
ogfod3
Urotensin-2 receptor 2.
      
 0.924
tmem161a
Transmembrane protein 161A.
      
 0.923
tmem53
Transmembrane protein 53.
      
 0.921
pigb
Mannosyltransferase.
      
 0.921
dgke
Diacylglycerol kinase.
      
 0.771
tmem209
Transmembrane protein 209.
      
 0.728
plekhs1
Zgc:158404.
      
 0.686
ccdc186
Si:ch211-225b10.4.
      
 0.686
nhlrc2
NHL repeat containing 2.
      
 0.657
dclre1a
DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae).
   
  
 0.651
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.