STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Morc3Uncharacterized protein. (160 aa)    
Predicted Functional Partners:
ENSPREP00000001288
Uncharacterized protein.
 
      0.739
ENSPREP00000019354
Zinc finger and BTB domain containing 4.
     
 0.472
abca12
ATP-binding cassette, sub-family A (ABC1), member 12.
      
 0.468
chaf1b
Chromatin assembly factor 1, subunit B.
 
      0.450
ifih1
Interferon induced with helicase C domain 1.
   
  
 0.449
nat10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.448
setdb1
SET domain bifurcated histone lysine methyltransferase 1b.
   
 0.409
LOC103457816
Uncharacterized protein.
   
 0.409
bend3
BEN domain containing 3.
      
 0.405
sae1
SUMO1 activating enzyme subunit 1.
      
 0.401
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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