STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Clg6h15orf65Uncharacterized protein. (131 aa)    
Predicted Functional Partners:
LOC103460395
Uncharacterized protein.
    
 
 0.856
cfap161
Uncharacterized protein.
    
 
 0.812
efhc2
EF-hand domain (C-terminal) containing 2.
    
 
 0.807
tekt3
Tektin 3.
    
 
 0.797
efhc1
EF-hand domain (C-terminal) containing 1.
    
 
 0.794
ccdc173
Coiled-coil domain containing 173.
    
   0.790
efhb
Uncharacterized protein.
    
   0.790
Pacrg
PARK2 co-regulated.
    
   0.790
tekt2
Tektin 2 (testicular).
    
   0.790
cfap20
Cilia and flagella associated protein 20.
    
   0.790
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.