STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
colqUncharacterized protein. (467 aa)    
Predicted Functional Partners:
musk
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.544
DOK7
Docking protein 7.
      
 0.471
ENSPREP00000013925
Uncharacterized protein.
  
     0.461
LOC103464342
Complement C1q C chain.
  
 
0.459
tep1
Uncharacterized protein.
    
 0.427
rapsn
Receptor-associated protein of the synapse, 43kD.
      
 0.422
hacl1
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
 
 
    0.405
hspg2
Heparan sulfate proteoglycan 2.
   
 
 0.402
ENSPREP00000019076
Uncharacterized protein.
 
  
   0.400
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.