STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kizKizuna centrosomal protein. (730 aa)    
Predicted Functional Partners:
sclt1
Sodium channel and clathrin linker 1.
    
  0.962
fancm
Uncharacterized protein.
    
 0.795
ENSPREP00000008873
PR/SET domain 1.
    
  0.637
LOC103473100
PR domain containing 1b, with ZNF domain.
    
  0.637
prdm1
PR domain containing 1a, with ZNF domain.
    
  0.637
tmtc4
Transmembrane O-mannosyltransferase targeting cadherins 4.
    
 0.620
mfhas1
Malignant fibrous histiocytoma amplified sequence 1.
    
 0.554
gprin1
GRIN_C domain-containing protein.
  
 
  0.517
spata7
Uncharacterized protein.
  
     0.492
cuedc2
CUE domain containing 2.
      
 0.485
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.