STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kizKizuna centrosomal protein. (730 aa)    
Predicted Functional Partners:
sclt1
Sodium channel and clathrin linker 1.
    
  0.673
gprin1
GRIN_C domain-containing protein.
  
 
  0.518
LOC103477768
Si:dkeyp-97a10.3.
  
 
  0.496
spata7
Uncharacterized protein.
  
     0.492
mfhas1
Malignant fibrous histiocytoma amplified sequence 1.
    
 0.486
cipc
CLOCK-interacting pacemaker a.
  
 
   0.467
LOC103474604
Uncharacterized protein.
  
     0.458
shld2
Si:ch211-134m17.9.
      
 0.453
ENSPREP00000000878
Uncharacterized protein.
  
 
  0.452
ENSPREP00000004424
Uncharacterized protein.
  
 
  0.436
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.