STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NSG1Neuronal vesicle trafficking associated 1. (148 aa)    
Predicted Functional Partners:
lrrc28
Leucine rich repeat containing 28.
      
 0.650
stx18
Syntaxin 18.
      
 0.586
supt3h
SPT3 homolog, SAGA and STAGA complex component.
      
 0.581
zbtb49
Zinc finger and BTB domain containing 49.
      
 0.569
pm20d1
Peptidase M20 domain containing 1, tandem duplicate 2.
      
 0.560
EVC2
EvC ciliary complex subunit 2.
      
 0.524
nsmaf
Neutral sphingomyelinase (N-SMase) activation associated factor.
      
 0.522
slc12a8
Solute carrier family 12 member 8.
      
 0.502
stmn2
Stathmin; Belongs to the stathmin family.
   
  
 0.494
LOC103478616
Stathmin 2a.
   
  
 0.494
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.