STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc13a3Solute carrier family 13 member 3. (619 aa)    
Predicted Functional Partners:
ENSPREP00000009332
Solute carrier family 30 member 5.
   
 
 0.557
slc33a1
Solute carrier family 33 member 1.
      
 0.503
mlycd
Malonyl-CoA decarboxylase.
    
 0.491
LOC103467347
Solute carrier family 26 member 10.
  
 
 0.451
LOC103456561
Solute carrier family 22 member 13b.
   
  
 0.408
LOC103456560
Solute carrier family 22 member 13b.
   
  
 0.408
LOC103456559
Solute carrier family 22 member 13b.
   
  
 0.408
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.