STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001400Uncharacterized protein. (444 aa)    
Predicted Functional Partners:
LOC103456513
Uncharacterized protein.
   
 0.969
axin1
Axin 1.
   
 0.969
VANGL2
VANGL planar cell polarity protein 2.
    
 0.968
VANGL1
Vang-like protein.
    
 0.968
LOC103480354
Vang-like protein.
    
 0.968
AXIN2
Axin 2.
   
 0.967
LOC103469222
Axin 2 (conductin, axil).
   
 0.967
daam2
Dishevelled associated activator of morphogenesis 2.
    
 0.962
daam1
Dishevelled associated activator of morphogenesis 1b.
    
 0.962
nkd1
NKD inhibitor of WNT signaling pathway 1.
    
 0.961
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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