STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103459424Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (422 aa)    
Predicted Functional Partners:
asph
Un-named hu7910.
   
 0.945
ryr2
Uncharacterized protein.
   
 0.922
LOC103476718
Ryanodine receptor 2b (cardiac).
   
 0.922
ENSPREP00000027318
Asp-B-Hydro_N domain-containing protein.
    
  0.904
LOC103476675
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
  
  
 
0.901
ENSPREP00000015615
B30.2/SPRY domain-containing protein.
   
 0.730
LOC103475680
Uncharacterized protein.
   
 0.730
RYR3
Ryanodine receptor 3.
   
 0.730
MYOZ1
Myozenin 1.
   
  
 0.707
ryr1
Ryanodine receptor 1b (skeletal).
    
  0.661
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (18%) [HD]