ENSPREP00000001430 protein (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPREP00000001430

Protein phosphatase 1, regulatory subunit 3Db. (264 aa)

Predicted Functional Partners:

gys2

0.888

gys1

0.888

phkb

0.673

phkg2

0.667

phkg1

0.667

LOC103480412

0.657

LOC103462037

0.657

calm2

0.650

depdc5

0.542

clg23h12orf66

0.529

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000001430	LOC103462037	ENSPREP00000001430	ENSPREP00000028584	Protein phosphatase 1, regulatory subunit 3Db.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	0.657
ENSPREP00000001430	LOC103480412	ENSPREP00000001430	ENSPREP00000015651	Protein phosphatase 1, regulatory subunit 3Db.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	0.657
ENSPREP00000001430	calm2	ENSPREP00000001430	ENSPREP00000015904	Protein phosphatase 1, regulatory subunit 3Db.	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.	0.650
ENSPREP00000001430	clg23h12orf66	ENSPREP00000001430	ENSPREP00000032224	Protein phosphatase 1, regulatory subunit 3Db.	Si:ch211-125a15.1.	0.529
ENSPREP00000001430	depdc5	ENSPREP00000001430	ENSPREP00000015297	Protein phosphatase 1, regulatory subunit 3Db.	DEP domain containing 5.	0.542
ENSPREP00000001430	gys1	ENSPREP00000001430	ENSPREP00000020428	Protein phosphatase 1, regulatory subunit 3Db.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.888
ENSPREP00000001430	gys2	ENSPREP00000001430	ENSPREP00000018026	Protein phosphatase 1, regulatory subunit 3Db.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.888
ENSPREP00000001430	phkb	ENSPREP00000001430	ENSPREP00000004907	Protein phosphatase 1, regulatory subunit 3Db.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	0.673
ENSPREP00000001430	phkg1	ENSPREP00000001430	ENSPREP00000032644	Protein phosphatase 1, regulatory subunit 3Db.	Phosphorylase kinase, gamma 1a (muscle); Belongs to the protein kinase superfamily.	0.667
ENSPREP00000001430	phkg2	ENSPREP00000001430	ENSPREP00000026190	Protein phosphatase 1, regulatory subunit 3Db.	Phosphorylase kinase, gamma 2 (testis); Belongs to the protein kinase superfamily.	0.667
LOC103462037	ENSPREP00000001430	ENSPREP00000028584	ENSPREP00000001430	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Protein phosphatase 1, regulatory subunit 3Db.	0.657
LOC103462037	LOC103480412	ENSPREP00000028584	ENSPREP00000015651	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	0.901
LOC103462037	calm2	ENSPREP00000028584	ENSPREP00000015904	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.	0.957
LOC103462037	phkb	ENSPREP00000028584	ENSPREP00000004907	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	0.974
LOC103462037	phkg1	ENSPREP00000028584	ENSPREP00000032644	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Phosphorylase kinase, gamma 1a (muscle); Belongs to the protein kinase superfamily.	0.980
LOC103462037	phkg2	ENSPREP00000028584	ENSPREP00000026190	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Phosphorylase kinase, gamma 2 (testis); Belongs to the protein kinase superfamily.	0.980
LOC103480412	ENSPREP00000001430	ENSPREP00000015651	ENSPREP00000001430	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Protein phosphatase 1, regulatory subunit 3Db.	0.657
LOC103480412	LOC103462037	ENSPREP00000015651	ENSPREP00000028584	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	0.901
LOC103480412	calm2	ENSPREP00000015651	ENSPREP00000015904	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.	0.957
LOC103480412	gys1	ENSPREP00000015651	ENSPREP00000020428	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.	0.475