STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hexdHexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing. (479 aa)    
Predicted Functional Partners:
LOC103466557
Beta-hexosaminidase.
     
 0.948
hexb
Beta-hexosaminidase.
     
 0.948
xylb
Xylulokinase homolog (H. influenzae).
      
 0.671
hddc3
HD domain containing 3.
   
    0.655
gask1a
Golgi associated kinase 1A.
      
 0.579
ino80e
INO80 complex subunit E.
    
 0.530
arglu1
Arginine and glutamate rich 1a.
    
 0.513
ints2
Integrator complex subunit 2.
    
 
 0.512
LOC103472833
Guanine nucleotide binding protein (G protein), beta polypeptide 3b.
   
 0.506
LOC103464516
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
 0.506
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.