STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103459411Vang-like protein. (539 aa)    
Predicted Functional Partners:
ENSPREP00000001400
Uncharacterized protein.
    
 0.955
dvl1
Dishevelled segment polarity protein 1a.
    
 0.955
dvl2
Dishevelled segment polarity protein 2.
    
 0.955
LOC103479347
Dishevelled segment polarity protein 3a.
    
 0.955
prickle2
Prickle homolog 2b.
    
 0.835
LOC103467721
Prickle homolog 3.
    
 0.830
PRICKLE1
Prickle homolog 1a.
    
 0.830
LOC103459444
Prickle homolog 1b.
    
 0.830
LOC103467536
Prickle homolog 2a.
    
 0.815
ENSPREP00000021919
Chromodomain helicase DNA binding protein 7.
      
 0.580
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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