Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103459828Uncharacterized protein. (449 aa)    
Predicted Functional Partners:
LOC103471147
Catenin (cadherin-associated protein), alpha 1.
   
 0.647
ctnna2
Catenin (cadherin-associated protein), alpha 2.
   
 0.647
ENSPREP00000028495
Uncharacterized protein.
   
 0.647
LOC103477053
Uncharacterized protein.
   
 0.647
cdh16
Cadherin 16, KSP-cadherin.
  
  
  0.621
fat1
FAT atypical cadherin 1a.
   
 
0.589
LOC103466684
Uncharacterized protein.
  
  
 
0.552
apc2
APC regulator of WNT signaling pathway 2.
     
 0.543
apc
APC regulator of WNT signaling pathway.
     
 0.543
ENSPREP00000000069
Si:dkey-30k22.7.
     
 
0.540
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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