STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460472Peroxisomal biogenesis factor 5-like b. (563 aa)    
Predicted Functional Partners:
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.996
LOC103464006
Sterol carrier protein 2b.
   
 0.996
pex14
Peroxisomal biogenesis factor 14.
   
 0.995
pex7
Peroxisomal biogenesis factor 7.
    
 0.993
nbr1
NBR1 autophagy cargo receptor a.
    
 0.972
eci2
Enoyl-CoA delta isomerase 2.
   
 0.964
ephx2
Epoxide hydrolase 2, cytoplasmic.
   
 0.952
hacl1
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
 
  
 0.950
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.946
fam185a
Family with sequence similarity 185 member A.
   
 0.883
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.