STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plbd2Phospholipase B-like; Putative phospholipase. (566 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2.
     
 0.625
siae
Sialic acid acetylesterase.
      
 0.623
LOC103462114
SH2 domain containing 3A.
    
 0.588
slc35e1
Solute carrier family 35 member E1.
      
 0.587
vwa5b2
Von Willebrand factor A domain containing 5B2.
      
 0.565
Sugct
Succinyl-CoA:glutarate-CoA transferase.
      
 0.529
cramp1
Cramped chromatin regulator homolog 1.
      
 0.529
nt5dc1
5'-nucleotidase domain containing 1.
      
 0.500
babam2
BRISC and BRCA1 A complex member 2.
      
 0.468
LOC103475400
Janus kinase and microtubule interacting protein 2.
      
 0.466
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.