STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103480765Kelch repeat-containing protein. (505 aa)    
Predicted Functional Partners:
ENSPREP00000004746
V-SNARE coiled-coil homology domain-containing protein.
     
 0.669
rhobtb3
Si:dkey-6b12.5.
   
 0.496
drg1
Developmentally regulated GTP binding protein 1.
    
   0.476
vps53
VPS53 subunit of GARP complex.
     
 0.475
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
   
 
  0.462
timm21
Uncharacterized protein.
   
    0.456
LOC103461037
RAN binding protein 2.
   
 0.452
GCC2
GRIP domain-containing protein.
   
 
  0.449
clg6hxorf56
Zgc:103697.
    
   0.448
pole2
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.448
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (30%) [HD]