STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fbxw9F-box and WD repeat domain containing 9. (582 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.875
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.860
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.828
cdc6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
    
 
 0.748
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.716
LOC103474461
Cullin 3; Belongs to the cullin family.
    
 0.716
ccdc22
Coiled-coil domain containing 22.
    
  0.677
commd1
Copper metabolism (Murr1) domain containing 1.
    
  0.640
LOC103477645
MCL1 apoptosis regulator, BCL2 family member b.
    
 
 0.629
rnf7
Ring finger protein 7.
    
 0.616
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.