STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001490Si:dkey-44k1.5. (683 aa)    
Predicted Functional Partners:
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.951
cnga3
Cyclic nucleotide gated channel subunit alpha 3a.
  
0.734
LOC103460308
Cyclic nucleotide gated channel subunit alpha 1b.
  
0.730
cnga4
Cyclic nucleotide gated channel subunit alpha 4.
  
0.711
LOC103467465
Cyclic nucleotide gated channel subunit alpha 1a.
  
0.702
ENSPREP00000031276
Cyclic nucleotide gated channel alpha 2b.
  
0.702
LOC103471015
Cyclic nucleotide-binding domain-containing protein.
  
0.700
ENSPREP00000026286
Cyclic nucleotide-binding domain-containing protein.
  
0.695
calm1
Calmodulin 3a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.536
calm3
Calmodulin 3.
   
 0.536
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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