STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103481434Uncharacterized protein. (653 aa)    
Predicted Functional Partners:
parp1
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
 0.815
parp2
Poly [ADP-ribose] polymerase.
    
 0.806
parp3
Poly [ADP-ribose] polymerase.
    
 0.737
LOC103474795
Uncharacterized protein.
    
 0.615
ENSPREP00000022268
VIT domain-containing protein.
    
 0.615
vwa5b2
Von Willebrand factor A domain containing 5B2.
    
 0.615
ENSPREP00000024644
Si:cabz01080528.1.
    
 0.615
ENSPREP00000027704
Uncharacterized protein.
    
 0.615
ENSPREP00000027738
Poly [ADP-ribose] polymerase.
    
 0.615
LOC108167021
Uncharacterized protein.
    
 0.615
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.