STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103475883Myosin XVIIIAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2468 aa)    
Predicted Functional Partners:
Myo18a
PDZ domain-containing protein.
 
      0.899
LOC103461533
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.766
LOC103469530
Myosin, light chain 2a, regulatory, cardiac, slow.
   
 0.704
MYL2
Myosin light chain 2.
   
 0.703
LOC103465374
Uncharacterized protein.
   
 0.575
LOC103467339
Myosin, light chain 6, alkali, smooth muscle and non-muscle.
   
 0.575
nlrc3
NLR family, CARD domain containing 3.
      
 0.566
LOC103464948
Myosin, light chain 9a, regulatory.
   
 0.533
LOC103456858
Uncharacterized protein.
   
 0.533
myl7
Myosin, light chain 7, regulatory.
   
 0.533
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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