STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcf15Transcription factor 15. (181 aa)    
Predicted Functional Partners:
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
  
 0.553
CBX1
Uncharacterized protein.
      
 0.513
CBX1-2
Chromobox homolog 1b (HP1 beta homolog Drosophila).
      
 0.513
cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
      
 0.475
LOC103463652
Transcription factor 3b.
   
 0.461
LOC103466449
BHLH domain-containing protein.
   
 0.461
TCF4
Transcription factor 4.
   
 0.461
ENSPREP00000024411
Uncharacterized protein.
   
 0.461
ENSPREP00000026287
Uncharacterized protein.
   
 0.461
tcf12
Transcription factor 12.
   
 0.461
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.