STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001506TMEM219 domain-containing protein. (280 aa)    
Predicted Functional Partners:
IGFBP3
Insulin like growth factor binding protein 3.
    
 0.676
yap1
Yes-associated protein 1.
    
 
 0.625
LOC103461037
RAN binding protein 2.
   
 
  0.524
nudc
NudC nuclear distribution protein.
     
  0.513
rcc2
Regulator of chromosome condensation 2.
     
  0.483
ENSPREP00000023746
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
  0.483
Ska2
SKA2 domain-containing protein.
     
  0.483
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
     
 0.429
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 0.416
mapre2
Microtubule-associated protein, RP/EB family, member 2.
    
 0.416
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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