STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474013Ras association domain family member 6. (315 aa)    
Predicted Functional Partners:
stk3
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.831
LOC103464816
Uncharacterized protein.
    
 0.831
mdm2
MDM2 proto-oncogene.
    
 
 0.735
amer2
APC membrane recruitment protein 2.
    
 
 0.656
rassf9
Ras association domain family member 9.
   
  
 0.595
usp10
Ubiquitin carboxyl-terminal hydrolase.
      
 0.584
insyn2b
Uncharacterized protein.
      
 0.582
map3k8
Mitogen-activated protein kinase kinase kinase 8.
   
  
 0.578
sav1
Salvador family WW domain containing protein 1.
    
 
 0.573
LOC103475990
Ajuba LIM protein.
      
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.