STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccdc136Coiled-coil domain containing 136b. (384 aa)    
Predicted Functional Partners:
GCC2
GRIP domain-containing protein.
    
  0.831
cttnbp2
Cortactin binding protein 2.
    
   0.751
ZNF385D
Zinc finger protein 385D.
    
 0.672
LOC103464463
Coiled-coil domain containing 114.
    
 
 0.606
ccdc151
Uncharacterized protein.
    
 0.530
LOC103477711
Zinc finger protein 385D.
    
 0.512
pdrg1
P53 and DNA-damage regulated 1.
    
 
 0.501
INKA2
Inka box actin regulator 2.
      
 0.473
kiaa0930
Zgc:172139.
      
 0.470
gskip
Gsk3b interacting protein.
      
 0.456
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.