STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103472210Sb:cb649. (423 aa)    
Predicted Functional Partners:
Wipf1
WH2 domain-containing protein.
    
0.912
was
WASP actin nucleation promoting factor a.
    
 0.836
wasl
WASP like actin nucleation promoting factor b.
    
 0.836
LOC103465991
WASP like actin nucleation promoting factor a.
    
0.836
hfm1
Helicase for meiosis 1.
    
 
 0.557
nck2
Cytoplasmic protein.
    
 0.505
nck1
Cytoplasmic protein.
    
 0.505
armh3
Armadillo like helical domain containing 3.
      
 0.469
bloc1s2
Biogenesis of lysosomal organelles complex-1, subunit 2.
      
 0.469
grb2
Growth factor receptor-bound protein 2b.
    
 0.461
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.