STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103472210Sb:cb649. (423 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
    
 0.944
Wipf1
WH2 domain-containing protein.
    
0.921
wipf2
WAS/WASL interacting protein family, member 2a.
  
 
0.918
was
WASP actin nucleation promoting factor a.
    
 0.870
wasl
WASP like actin nucleation promoting factor b.
    
 0.870
LOC103465991
WASP like actin nucleation promoting factor a.
    
 0.870
nck2
Cytoplasmic protein.
    
 0.832
nck1
Cytoplasmic protein.
    
 0.832
CEP128
Centrosomal protein 128.
    
 0.606
armh3
Armadillo like helical domain containing 3.
      
 0.603
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.