STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
srxn1Sulfiredoxin. (149 aa)    
Predicted Functional Partners:
PRDX2
Peroxiredoxin 2.
   
 0.945
LOC103479005
Peroxiredoxin 1.
   
 0.945
prdx3
Peroxiredoxin 3.
   
 0.902
prdx4
Peroxiredoxin 4.
   
 0.901
dennd10
DENN domain containing 10.
   
 0.862
nfe2l2
Nuclear factor, erythroid 2-like 2a.
    
 0.804
prdx6
Peroxiredoxin 6.
   
 0.730
PRDX6
Peroxiredoxin 6.
   
 0.730
gclm
Glutamate-cysteine ligase, modifier subunit.
   
  
 0.627
rrm2b
Ribonucleotide reductase M2 b.
    
 
 0.612
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.