STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fa2hFatty acid 2-hydroxylase; Catalyzes stereospecific hydroxylation of free fatty acids at the C-2 position to produce (R)-2-hydroxy fatty acids, which are building blocks of sphingolipids and glycosphingolipids common in neural tissue and epidermis. Plays an essential role in the synthesis of galactosphingolipids of the myelin sheath. Responsible for the synthesis of sphingolipids and glycosphingolipids involved in the formation of epidermal lamellar bodies critical for skin permeability barrier. Participates in the synthesis of glycosphingolipids and a fraction of type II wax diesters i [...] (381 aa)    
Predicted Functional Partners:
ENSPREP00000015100
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
 0.779
LOC103462495
Cytochrome b5 type B; Belongs to the cytochrome b5 family.
   
 0.779
agmo
Alkylglycerol monooxygenase; Belongs to the sterol desaturase family.
      
 0.775
ENSPREP00000002275
DED domain-containing protein.
    
 
 0.765
LOC103460312
Cytochrome b5 domain containing 1; Belongs to the cytochrome b5 family.
   
 0.758
LOC103478806
Cytochrome b5 reductase 4.
   
 0.739
mrpl37
Mitochondrial ribosomal protein L37.
   
 0.716
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 
 0.709
msmo1
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 
 0.687
ch25h
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
   
 
 0.687
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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