STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FKBP14Peptidylprolyl isomerase. (209 aa)    
Predicted Functional Partners:
clg8h17orf75
Zgc:153240.
      
 0.670
ENSPREP00000007769
Filamin binding LIM protein 1.
      
 0.670
efcab1
Uncharacterized protein.
   
 
 0.613
gpatch3
G patch domain containing 3.
    
 
 0.588
rspry1
Ring finger and SPRY domain containing 1.
      
 0.586
ATAD3A
ATPase family AAA domain containing 3A.
      
 0.545
ppib
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.534
ENSPREP00000004786
AF4/FMR2 family, member 2.
    
 
 0.528
aff3
AF4/FMR2 family, member 3.
    
 
 0.528
eaf1
EAF domain-containing protein.
      
 0.520
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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