STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103459403Flavodoxin_2 domain-containing protein. (262 aa)    
Predicted Functional Partners:
ggcx
Gamma-glutamyl carboxylase.
     
 0.922
LOC103481412
Vitamin K epoxide reductase complex, subunit 1.
     
 0.920
vkorc1l1
Vitamin K epoxide reductase complex, subunit 1-like 1.
     
 0.916
LOC103459381
Flavodoxin_2 domain-containing protein.
  
  
 
0.900
odc1
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.634
tmco3
Transmembrane and coiled-coil domains 3.
  
 
 0.601
ENSPREP00000004394
Jumonji domain containing 7.
  
 
 0.580
iyd
Iodotyrosine deiodinase.
  
 
 0.558
LOC103472370
Antizyme inhibitor 1b; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.462
AZIN1
Antizyme inhibitor 1a; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.462
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.