STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVCEvC ciliary complex subunit 1. (967 aa)    
Predicted Functional Partners:
EVC2
EvC ciliary complex subunit 2.
  
 
 0.995
smo
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.979
HECTD4
HECT domain E3 ubiquitin protein ligase 4.
   
 0.656
gga3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.
      
 0.630
brca1
Uncharacterized protein.
  
 
 0.624
LOC103457154
Uncharacterized protein.
   
 0.554
efcab7
EF-hand calcium binding domain 7.
    
 0.546
dhcr24
24-dehydrocholesterol reductase.
    
 
 0.533
gli3
Uncharacterized protein.
   
 0.514
LOC103462017
Uncharacterized protein.
    
 0.487
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.