STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
e2f4E2F transcription factor 4. (384 aa)    
Predicted Functional Partners:
tfdp1
Transcription factor.
   
 0.989
ENSPREP00000023356
Retinoblastoma-like 1 (p107).
   
 0.989
LOC103466787
Retinoblastoma-like 2 (p130).
   
 0.989
ENSPREP00000032744
Retinoblastoma 1.
   
 0.958
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.931
lin37
Lin-37 DREAM MuvB core complex component.
    
 0.910
ENSPREP00000002421
E2F_TDP domain-containing protein.
  
  
 
0.908
ENSPREP00000020452
E2F_TDP domain-containing protein.
  
  
 
0.903
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.903
LOC103473773
Mothers against decapentaplegic homolog.
    
 0.845
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.