STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478581Chromobox homolog 3b. (187 aa)    
Predicted Functional Partners:
LOC103472202
Chromobox homolog 3a (HP1 gamma homolog, Drosophila).
  
  
 
0.904
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 0.590
LOC103470692
Histone H2A; Belongs to the histone H2A family.
   
 0.590
tpd52l1
Tpd52 like 1.
      
 0.571
chaf1a
Chromatin assembly factor 1, subunit A (p150).
   
 
 0.562
emsy
EMSY transcriptional repressor, BRCA2 interacting.
    
 
 0.549
rnf2
Ring finger protein 2.
    
 0.513
RING1
Ring finger protein 1.
    
 0.513
ENSPREP00000002301
Histone H3; Belongs to the histone H3 family.
   
 0.475
LOC103461301
Histone H3; Belongs to the histone H3 family.
   
 0.475
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.