STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hspa12bHeat shock protein 12B. (764 aa)    
Predicted Functional Partners:
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
   
 0.862
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 0.833
hspa13
Heat shock protein 70 family, member 13.
     
 0.831
gak
Cyclin G associated kinase.
   
 0.806
hspa4l
Heat shock protein 4 like.
   
 0.753
LOC103471205
Heat shock protein 4b.
   
 0.715
LOC103475404
Heat shock protein 4a.
   
 0.696
bag3
BCL2 associated athanogene 3.
   
 0.692
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
  
 0.652
ENSPREP00000028517
ANK_REP_REGION domain-containing protein.
  
 0.646
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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