STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103469301Uncharacterized protein. (695 aa)    
Predicted Functional Partners:
LOC103478148
Interleukin 6 receptor.
   
 0.614
canx
Calnexin.
    
  0.607
LOC103473532
Uncharacterized protein.
   
 0.606
LOC103473535
Ciliary neurotrophic factor receptor.
   
 0.606
ebi3
Epstein-Barr virus induced 3.
   
 0.606
LOC103478037
Interleukin 11a.
    
 0.549
LOC103463800
Calmegin.
    
  0.510
lepr
Uncharacterized protein.
     
 0.483
ENSPREP00000004230
Uncharacterized protein.
      
 0.469
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
 0.432
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.