STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cabp2Calcium binding protein 2a. (243 aa)    
Predicted Functional Partners:
nphp3
Nephronophthisis 3.
    
 0.774
LOC103481790
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.569
LOC103461390
Uncharacterized protein.
   
 0.569
LOC103473803
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.569
LOC103469345
STRA6-like.
   
 0.566
tekt4
Tektin 4.
    
 
 0.565
rp2
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
     
  0.552
pnpla6
Patatin-like phospholipase domain containing 6.
    
 0.550
ENSPREP00000027150
Uncharacterized protein.
   
 0.545
xpa
Xeroderma pigmentosum, complementation group A.
    
 0.544
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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