STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474035Secreted phosphoprotein 1. (356 aa)    
Predicted Functional Partners:
LOC103465962
SPARC-like 1.
      
 0.675
LOC103466132
CD44 molecule (Indian blood group) b.
   
 
 0.658
fancm
Uncharacterized protein.
    
 0.586
ENSPREP00000013903
Uncharacterized protein.
    
 0.584
lpar3
Lysophosphatidic acid receptor 3; Belongs to the G-protein coupled receptor 1 family.
      
 0.536
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.528
ddx20
DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.
   
 0.511
LOC103478189
Uncharacterized protein.
    
 
 0.505
sp7
Sp7 transcription factor.
   
 0.493
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.481
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.