STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000001630RHD domain-containing protein. (238 aa)    
Predicted Functional Partners:
Nfatc4
Uncharacterized protein.
 
      0.865
nfatc2
Nuclear factor of activated T cells 2a.
    
 
 0.733
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.707
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
  0.693
rps27a
Ribosomal protein S27a.
    
  0.666
CDC25B
Cell division cycle 25B.
      
 0.606
pold1
DNA polymerase.
      
 0.595
ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.585
optn
Optineurin.
    
 0.585
LOC103480422
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
    
 0.562
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.