STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhl6Kelch-like family member 6. (633 aa)    
Predicted Functional Partners:
rc3h2
Ring finger and CCCH-type domains 2.
   
 
 0.940
PTPN14
Protein tyrosine phosphatase non-receptor type 14.
      
 0.922
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.912
LOC103474461
Cullin 3; Belongs to the cullin family.
    
 0.912
tie1
Tyrosine kinase with immunoglobulin-like and EGF-like domains 1.
   
  
 0.722
KLHDC2
Kelch domain containing 2.
      
 0.696
dapp1
Dual adaptor of phosphotyrosine and 3-phosphoinositides.
   
 
 0.689
skap2
Src kinase associated phosphoprotein 2.
   
  
 0.687
nudcd3
NudC domain containing 3.
    
 
 0.668
pdgfc
Platelet derived growth factor c; Belongs to the PDGF/VEGF growth factor family.
      
 0.656
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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