STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103469298Regulatory factor X, 1a (influences HLA class II expression). (915 aa)    
Predicted Functional Partners:
LOC103473075
Uncharacterized protein.
    
 
 0.933
atr
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.690
zbtb18
Zinc finger and BTB domain containing 18.
    
 
 0.663
ENSPREP00000016558
Fork-head domain-containing protein.
    
 
 0.657
LOC103481016
Forkhead box J1b.
    
 
 0.657
btaf1
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.
    
   0.642
chek2
Checkpoint kinase 2.
   
 
 0.569
myb
V-myb avian myeloblastosis viral oncogene homolog.
    
 
 0.564
ENSPREP00000031846
Cyclin D binding myb-like transcription factor 1.
    
   0.560
baz1a
Bromodomain adjacent to zinc finger domain, 1A.
    
 
 0.556
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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