STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fkbp7Peptidylprolyl isomerase. (222 aa)    
Predicted Functional Partners:
Adat3
Adenosine deaminase tRNA specific 3.
      
 0.621
ENSPREP00000019837
Peptidylprolyl isomerase.
  
   
 0.590
rpl13a
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.501
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 0.486
rangap1
RAN GTPase activating protein 1a.
   
  
 0.478
LOC103481999
Ran GTPase activating protein 1b.
   
  
 0.478
snap29
Synaptosome associated protein 29.
   
  
 0.472
jade1
Jade family PHD finger 1.
      
 0.468
chmp2b
Charged multivesicular body protein 2Bb.
      
 0.468
hyou1
Hypoxia up-regulated 1.
   
 0.462
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.