STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ica1Islet cell autoantigen 1. (431 aa)    
Predicted Functional Partners:
pick1
Protein interacting with prkca 1.
   
 
 0.844
rab2a
RAB2A, member RAS oncogene family.
    
 
 0.765
lcmt1
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
    
   0.562
rundc1
RUN domain containing 1.
    
 
 0.539
dnajc27
DnaJ (Hsp40) homolog, subfamily C, member 27.
    
 
 0.532
ccdc186
Si:ch211-225b10.4.
      
 0.521
ATAD3A
ATPase family AAA domain containing 3A.
      
 0.503
gk5
Glycerol kinase 5; Belongs to the FGGY kinase family.
      
 0.463
LOC103473918
Cytochrome P450, family 20, subfamily A, polypeptide 1.
      
 0.452
vps50
VPS50 EARP/GARPII complex subunit.
      
 0.408
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.