STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zbtb37Zinc finger and BTB domain containing 37. (574 aa)    
Predicted Functional Partners:
dars2
Aspartyl-tRNA synthetase 2, mitochondrial.
      
 0.670
smg7
SMG7 nonsense mediated mRNA decay factor.
  
 
 
 0.561
gas2
Growth arrest-specific 2a.
    
 0.531
MAFG
MAF bZIP transcription factor G.
    
  0.524
ndfip2
Nedd4 family interacting protein 2.
      
 0.497
wbp2
WW domain binding protein 2.
      
 0.495
txndc16
Thioredoxin domain containing 16.
    
 
 0.491
polr1b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.489
mphosph6
M-phase phosphoprotein 6.
      
 0.477
golga2
Golgin A2.
      
 0.461
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.