STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ube2j1Ubiquitin-conjugating enzyme E2, J1. (275 aa)    
Predicted Functional Partners:
ube2g2
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast).
   
 0.842
ube2w
UBIQUITIN_CONJUGAT_2 domain-containing protein.
     
 0.836
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.834
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.822
ube2s
Ubiquitin-conjugating enzyme E2S; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.806
Birc6
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.790
LOC103459260
Ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
   
 0.785
LOC103466080
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.785
ENSPREP00000001588
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.783
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.783
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.