STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTCFCCCTC-binding factor. (760 aa)    
Predicted Functional Partners:
LOC103478347
RAD21 cohesin complex component a.
   
 0.860
smc3
Structural maintenance of chromosomes protein.
   
 0.723
LOC103472890
RAD21 cohesin complex component b.
   
 0.696
LOC103467726
RAD21 cohesin complex component like 1.
   
 0.696
zbtb33
Zinc finger and BTB domain containing 33.
    
 
 0.623
igf2
IlGF domain-containing protein.
      
 0.590
maml3
Mastermind-like transcriptional coactivator 3.
    
 0.563
maml2
MamL-1 domain-containing protein.
    
 0.563
med12
Mediator complex subunit 12.
   
 0.554
wrap53
WD repeat containing, antisense to TP53.
     
 0.546
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.