pdcd2l protein (Poecilia reticulata) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

pdcd2l

Programmed cell death 2-like. (352 aa)

Predicted Functional Partners:

prmt3

0.795

mrps5

0.640

znf277

0.604

bysl

0.579

pabpn1

0.549

wdpcp

0.545

pno1

0.457

PABPN1L

0.457

rpl4

0.445

ltv1

0.445

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PABPN1L	pabpn1	ENSPREP00000033248	ENSPREP00000016786	Poly(A) binding protein nuclear 1 like, cytoplasmic.	Poly(A) binding protein, nuclear 1.	0.905
PABPN1L	pdcd2l	ENSPREP00000033248	ENSPREP00000001678	Poly(A) binding protein nuclear 1 like, cytoplasmic.	Programmed cell death 2-like.	0.457
bysl	ltv1	ENSPREP00000006398	ENSPREP00000031080	Bystin-like.	LTV1 ribosome biogenesis factor.	0.999
bysl	mrps5	ENSPREP00000006398	ENSPREP00000002339	Bystin-like.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.992
bysl	pdcd2l	ENSPREP00000006398	ENSPREP00000001678	Bystin-like.	Programmed cell death 2-like.	0.579
bysl	pno1	ENSPREP00000006398	ENSPREP00000001064	Bystin-like.	Partner of NOB1 homolog.	0.989
bysl	prmt3	ENSPREP00000006398	ENSPREP00000029341	Bystin-like.	Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.692
bysl	rpl4	ENSPREP00000006398	ENSPREP00000015520	Bystin-like.	Ribosomal protein L4.	0.880
ltv1	bysl	ENSPREP00000031080	ENSPREP00000006398	LTV1 ribosome biogenesis factor.	Bystin-like.	0.999
ltv1	mrps5	ENSPREP00000031080	ENSPREP00000002339	LTV1 ribosome biogenesis factor.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.992
ltv1	pdcd2l	ENSPREP00000031080	ENSPREP00000001678	LTV1 ribosome biogenesis factor.	Programmed cell death 2-like.	0.445
ltv1	pno1	ENSPREP00000031080	ENSPREP00000001064	LTV1 ribosome biogenesis factor.	Partner of NOB1 homolog.	0.979
ltv1	prmt3	ENSPREP00000031080	ENSPREP00000029341	LTV1 ribosome biogenesis factor.	Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.522
ltv1	rpl4	ENSPREP00000031080	ENSPREP00000015520	LTV1 ribosome biogenesis factor.	Ribosomal protein L4.	0.793
mrps5	bysl	ENSPREP00000002339	ENSPREP00000006398	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Bystin-like.	0.992
mrps5	ltv1	ENSPREP00000002339	ENSPREP00000031080	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	LTV1 ribosome biogenesis factor.	0.992
mrps5	pdcd2l	ENSPREP00000002339	ENSPREP00000001678	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Programmed cell death 2-like.	0.640
mrps5	pno1	ENSPREP00000002339	ENSPREP00000001064	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Partner of NOB1 homolog.	0.870
mrps5	prmt3	ENSPREP00000002339	ENSPREP00000029341	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.645
mrps5	rpl4	ENSPREP00000002339	ENSPREP00000015520	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	Ribosomal protein L4.	0.990