STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc45a3Zgc:77158. (546 aa)    
Predicted Functional Partners:
phax
Phosphorylated adaptor for RNA export.
    
   0.782
ENSPREP00000005145
Si:ch211-113j13.2.
      
 0.638
RAB29
RAB29, member RAS oncogene family.
      
 0.503
pstpip2
Proline-serine-threonine phosphatase interacting protein 2.
      
 0.499
pm20d1
Peptidase M20 domain containing 1, tandem duplicate 2.
      
 0.499
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
      
 0.478
ddrgk1
Uncharacterized protein.
      
 0.472
LOC103465438
ETS transcription factor ELK4.
      
 0.460
huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
   0.453
srrm1
Serine/arginine repetitive matrix 1.
   
  
 0.449
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.