STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468029MSP domain-containing protein. (260 aa)    
Predicted Functional Partners:
stard3
StAR-related lipid transfer (START) domain containing 3.
    
 
 0.740
bcap31
B cell receptor associated protein 31.
   
 0.667
bcap29
Uncharacterized protein.
   
 0.667
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.602
LOC103461134
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.578
LOC103473696
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.578
LOC103480431
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.578
LOC103470291
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.578
osbpl3
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.577
osbpl6
Oxysterol-binding protein; Belongs to the OSBP family.
    
 0.577
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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